Insertion junction: LMJ.RY0402.254512_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.254512
Chromosome:scaffold 19
Location:148604
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre19.g750947 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACACCTTGTTCTTCTTGTTCCAGCATA
Internal bar code:ACGAGTCAGAAGAGGCAATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:332
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGGGTTTGTGCAGTGTT
Suggested primer 2:GAACTGCGGCATCCAAGTAT