Insertion junction: LMJ.RY0402.254681_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.254681
Chromosome:chromosome 3
Location:9041989
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g210401 (1 of 1) PTHR14614//PTHR14614:SF15 - HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGAGGAGGGGGTTTGAAGTAGGGGAAG
Internal bar code:TTTGGAAATCCCATTCGGCAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:556
LEAP-Seq percent confirming:91.5254
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTCGATGCTCTGTGGTA
Suggested primer 2:AGAGCCACCCAAATGTCAAC