Insertion junction: LMJ.RY0402.254757_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.254757
Chromosome:chromosome 1
Location:7969612
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g068012 PPR5,FAP330 (1 of 6) PF01535 - PPR repeat (PPR); PentatricoPeptide Repeat protein 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAACCCCTGCAGAGCACCTGGCATGCG
Internal bar code:TCAGCCCGCCGGTGTTGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:180
LEAP-Seq percent confirming:94.0639
LEAP-Seq n confirming:206
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCTATGCCAGTAAGGTCG
Suggested primer 2:GCATAGTGGGCAAAGGTGAT