Insertion junction: LMJ.RY0402.254856_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.254856
Chromosome:chromosome 6
Location:5863289
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g287950 SRH13 (1 of 1) K10779//K10876 - transcriptional regulator ATRX [EC:3.6.4.12] (ATRX) // RAD54-like protein 2 [EC:3.6.4.12] (RAD54L2); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTTGCAGCATTGAGGCTGCACGTGCCC
Internal bar code:CGGAGGTGATTAAGTGCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:434
LEAP-Seq percent confirming:80.7087
LEAP-Seq n confirming:205
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TACACTTTTATACGCCGCCC
Suggested primer 2:TGTTCCCAGTAAGGGTCCTG