Insertion junction: LMJ.RY0402.255001_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.255001
Chromosome:chromosome 1
Location:5051165
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g034900 CDPK5 (1 of 4) PTHR24347:SF138 - PROTEIN F32D8.1; Calcium/calmodulin-dependent protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACTAATGTTCACCACGCGCGTGTCCAAT
Internal bar code:TTACACATGCGGGTCCCTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:29
LEAP-Seq percent confirming:99.4901
LEAP-Seq n confirming:1756
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGTGGGTTCATTGCTGA
Suggested primer 2:TGGATGGTGGGGTATTAGGA