Insertion junction: LMJ.RY0402.255084_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.255084
Chromosome:chromosome 9
Location:5757589
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g401849 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACATCTGCGTTTCGACTTTGCCAGCGGT
Internal bar code:TGGAATCAGAATTTAGCAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:390
LEAP-Seq percent confirming:12.287
LEAP-Seq n confirming:137
LEAP-Seq n nonconfirming:978
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGACTTGAACGCCCATAG
Suggested primer 2:CAGTATGCCCACACCTTCCT