Insertion junction: LMJ.RY0402.255084_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.255084
Chromosome:chromosome 9
Location:5757593
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g401849 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCATACCATACGGTGTACATGCATGTTA
Internal bar code:ACCCGTGAACGTAAAAGACACG

Confirmation - LEAP-Seq

LEAP-Seq distance:271
LEAP-Seq percent confirming:99.0215
LEAP-Seq n confirming:506
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGACTTGAACGCCCATAG
Suggested primer 2:CAGTATGCCCACACCTTCCT