Insertion junction: LMJ.RY0402.255253_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.255253
Chromosome:chromosome 17
Location:3479904
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g724950 (1 of 1) PTHR16161:SF0 - TRANSCRIPTIONAL PROTEIN SWT1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGCGTTCGAAGTGCGCGCAAGGGGGAA
Internal bar code:GAGCTTTTGGAGAAGTTATAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:451
LEAP-Seq percent confirming:98.2993
LEAP-Seq n confirming:289
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCTCTCCAATGACAACG
Suggested primer 2:CAAAGATATGGGTGGGGATG