Insertion junction: LMJ.RY0402.255628_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.255628
Chromosome:chromosome 9
Location:3398946
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g388912 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGCCCGTTAAGCCAGTATGTAGCCGTAT
Internal bar code:CCTGGCTCTGGGGCCTCTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:397
LEAP-Seq percent confirming:98.4615
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCGCTCTTAAAACGGCAT
Suggested primer 2:AGCACGACATGTAAGGGAGG