Insertion junction: LMJ.RY0402.255644_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.255644
Chromosome:chromosome 12
Location:2087097
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g509500 (1 of 1) IPR000595//IPR002048//IPR011992//IPR018490//IPR029530 - Cyclic nucleotide-binding domain // EF-hand domain // EF-hand domain pair // Cyclic nucleotide-binding-like // Cell division control protein 31 gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTAAAGAGACTCTGACAAGAACACAACA
Internal bar code:GCCGAAAAGGGTAGCCGGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:511
LEAP-Seq percent confirming:92.2551
LEAP-Seq n confirming:405
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTTGCCAGGATTGGACT
Suggested primer 2:AGGCTTTCAGGCAGTGGTAG