Insertion junction: LMJ.RY0402.255671_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.255671
Chromosome:chromosome 12
Location:4484799
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g521700 SSS6,SSS1A Soluble starch synthase IA; (1 of 5) K00703 - starch synthase (E2.4.1.21, glgA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATGACGGAGAGGCTGATGAGGCCCACT
Internal bar code:CTTATGCGAGAGGCCTGGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:319
LEAP-Seq percent confirming:75.4386
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GACAACCTCTTCCGCTTCAG
Suggested primer 2:GCACCACCACAACCACTATG