Insertion junction: LMJ.RY0402.255842_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.255842
Chromosome:chromosome 3
Location:4487803
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g176200 (1 of 1) PTHR22904//PTHR22904:SF364 - TPR REPEAT CONTAINING PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAGCCAGCACTCTTCCCGCGCCTATGTT
Internal bar code:ATCCTGGGGCGGACGCGCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:476
LEAP-Seq percent confirming:99.8431
LEAP-Seq n confirming:3818
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTAGCAGCAGTAGCAGCG
Suggested primer 2:GTGGTGATTGGTGCAATGAG