Insertion junction: LMJ.RY0402.255892_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.255892
Chromosome:chromosome 5
Location:2969959
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g238322 TSW2 (1 of 2) 6.1.1.2 - Tryptophan--tRNA ligase / Tryptophanyl-tRNA synthetase; Putative tryptophanyl-tRNA synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCACCGTTCAAGCGTTCTCGAGAACTAC
Internal bar code:TATATCTTGGTCACGTTACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:416
LEAP-Seq percent confirming:99.3188
LEAP-Seq n confirming:1458
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAAATCATGTTTGGCGGC
Suggested primer 2:ATGTGTCGGTGTCAGTGGAA