Insertion junction: LMJ.RY0402.256198_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.256198
Chromosome:chromosome 9
Location:3551023
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g389986 (1 of 17) IPR029069 - HotDog domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACGTCCGCAGCCAGTAGTTGGTGCCGG
Internal bar code:GAGCAGGCATGGTCAGTGCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:460
LEAP-Seq percent confirming:96.0166
LEAP-Seq n confirming:1157
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCAAGCAAGGGTTCTACC
Suggested primer 2:GGGTGTATTGCTGCTTGGTT