Insertion junction: LMJ.RY0402.256665_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.256665
Chromosome:chromosome 2
Location:4156810
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g098200 CGL103,PRT1 (1 of 1) PF00569//PF13920 - Zinc finger, ZZ type (ZZ) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3); Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAAACTGCAAAGCCTGGCTGCCACTAG
Internal bar code:TGGGATCCTAATTGCGGGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:235
LEAP-Seq percent confirming:38.0884
LEAP-Seq n confirming:3188
LEAP-Seq n nonconfirming:5182
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGACATGTTCGACCTGG
Suggested primer 2:CACCGTTCCCTGTAAGCAAT