Insertion junction: LMJ.RY0402.256806_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.256806
Chromosome:chromosome 1
Location:5600027
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g039750 PDF1B (1 of 1) PTHR10458//PTHR10458:SF2 - PEPTIDE DEFORMYLASE // PEPTIDE DEFORMYLASE 1B, CHLOROPLASTIC/MITOCHONDRIAL; Peptide deformylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGTCACTAGGCATGCCGGCGTCGAAGA
Internal bar code:TCAAAGCGCAAGGGAAGGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:545
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:258
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGTAACTGCGGCGTTTG
Suggested primer 2:GCAGACTTCCATGCTCCTTC