Insertion junction: LMJ.RY0402.256904_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.256904
Chromosome:chromosome 4
Location:3014085
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g225000 (1 of 34) IPR003072 - Orphan nuclear receptor, NOR1 type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTGAAGATTCCAGCCCAAACTGAATCG
Internal bar code:GGCACACCTTCTTCGCCATGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:541
LEAP-Seq percent confirming:99.262
LEAP-Seq n confirming:1614
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGTGACGTGGTGTGTTG
Suggested primer 2:AGCAACAGCAGCAGCAGTAA