Insertion junction: LMJ.RY0402.257004_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.257004
Chromosome:chromosome_9
Location:3389996
Confidence (%):95
Locus systematic id Locus common name Defline Orientation Feature
Cre09.g388875 sense intron

Insertion site details

Flanking sequence (orientation from cassette outwards):AGGTCCTTGCCAGCCTAGTCCTTTGAACGG
Internal bar code:GGTGGGTGCCTGGTGCGTCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1052
LEAP-Seq percent confirming:99.7367
LEAP-Seq n confirming:8713
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCTCGATTTCTCGTCAC
Suggested primer 2:TGCCAAGGTTGAGGATTTTC