Insertion junction: LMJ.RY0402.257057_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.257057
Chromosome:chromosome 17
Location:4043204
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g729101 PHC37 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Putative pherophorin-chlamydomonas homolog CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGACCCGGGGCTTCTCGCAGTTGTTCTC
Internal bar code:TTCACGTCTGATGGAAAAGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:510
LEAP-Seq percent confirming:99.4932
LEAP-Seq n confirming:589
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGGGAGGAGGAGGAGAG
Suggested primer 2:CTCCTCCCTCTCCTCCTCCT