Insertion junction: LMJ.RY0402.257101_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.257101
Chromosome:chromosome 13
Location:2229460
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre13.g578550 (1 of 3) IPR000104//IPR011009 - Antifreeze protein, type I // Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCGGATACCGTACGCTCTCAGCATACA
Internal bar code:GGACGCGACTGGTTGTCGCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:507
LEAP-Seq percent confirming:99.032
LEAP-Seq n confirming:1330
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGTATCATGATTGCTCCCGA
Suggested primer 2:GCTATCTAGGCAGGCAGGTG