Insertion junction: LMJ.RY0402.257129_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.257129
Chromosome:scaffold 19
Location:69868
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre19.g750547 NDA2 thylakoid NADH dehydrogenase; (1 of 3) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATAATCAGTTAAGGAAATGGCAGACGGT
Internal bar code:GACACGCGAACGCTGAACCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:565
LEAP-Seq percent confirming:99.1687
LEAP-Seq n confirming:1193
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCAATGTCCTTGCACAGAGC
Suggested primer 2:GATACGCAAGGAAGCAGGAG