Insertion junction: LMJ.RY0402.257202_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.257202
Chromosome:chromosome 16
Location:2367232
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g659850 CGL37 conserved protein related to shikimate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATTCACCACCAGGCATTAACATCGCCC
Internal bar code:GTCGATAGAGGTACACCCGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:543
LEAP-Seq percent confirming:94.8776
LEAP-Seq n confirming:2908
LEAP-Seq n nonconfirming:157
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGTGATAAGCAAATGTT
Suggested primer 2:GCTGCTTTTGCTCACCCTAC