Insertion junction: LMJ.SG0182.006560_1

Overview

Insertion cassette:pMJ013b
Side of cassette:5'
Strand:+
Strain:LMJ.SG0182.006560
Chromosome:chromosome 12
Location:4112713
Confidence (%):75
Locus systematic id Locus common name Defline Feature
Cre12.g518000 SCA2,SECA2 (1 of 1) PF01043//PF07517 - SecA preprotein cross-linking domain (SecA_PP_bind) // SecA DEAD-like domain (SecA_DEAD); Chloroplast-associated SecA protein MULTIPLE_SPLICE_VARIANTS
g12774 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGAGCGGCTCTGAAACAT
Internal bar code:

Confirmation - LEAP-Seq

LEAP-Seq distance:1213
LEAP-Seq percent confirming:98.9455
LEAP-Seq n confirming:1126
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAACACGGACAAGGCTCT
Suggested primer 2:TTGATATTCAGGGGCGGTAG