Insertion junction: LMJ.SG0182.008520_1

Overview

Insertion cassette:pMJ013b
Side of cassette:3'
Strand:+
Strain:LMJ.SG0182.008520
Chromosome:chromosome 9
Location:3277279
Confidence (%):75
Locus systematic id Locus common name Defline Feature
g9603 VDR1 Violaxanthin de-epoxidase-related protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACTCGCGACATTACATTGC
Internal bar code:

Confirmation - LEAP-Seq

LEAP-Seq distance:585
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:103
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCTGGCGTTGTTGTGTA
Suggested primer 2:GACTTGTTCATTGGGTGGCT