Insertion junction: LMJ.SG0182.017359_1

Overview

Insertion cassette:pMJ013b
Side of cassette:5'
Strand:-
Strain:LMJ.SG0182.017359
Chromosome:chromosome 4
Location:3387423
Confidence (%):75
Locus systematic id Locus common name Defline Feature
Cre04.g227500 SRR18 Scavenger receptor cysteine rich (SRCR) protein; (1 of 2) IPR001190//IPR006626//IPR011050//IPR017448 - SRCR domain // Parallel beta-helix repeat // Pectin lyase fold/virulence factor // SRCR-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGGCAGTGCAATGCCGT
Internal bar code:

Confirmation - LEAP-Seq

LEAP-Seq distance:661
LEAP-Seq percent confirming:92.2481
LEAP-Seq n confirming:119
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCTCGCACATGCTTCAA
Suggested primer 2:GTCGTCATTCATGGCGTATG