Gene: Cre01.g030500

Overview

Common name:	CYG58
Defline:	(1 of 1) K11858 - ubiquitin carboxyl-terminal hydrolase 48 [EC:3.4.19.12] (USP48); Adenylate/guanylate cyclase
Description:
Synonyms:	Cre01.g030500.t1.1,g691.t1,CYG58
Chromosome:	chromosome 1

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.012169_1	CLIP2.012169	CDS	80	6.1
CLIP2.012169_2	CLIP2.012169	CDS	80	6.1
CLIP2.013806_1	CLIP2.013806	CDS	80	6.1
CLIP2.013806_2	CLIP2.013806	CDS	80	6.1
CLIP2.015472_1	CLIP2.015472	CDS	80	6.1
CLIP2.015472_2	CLIP2.015472	CDS	80	6.1
CLIP2.026014_1	CLIP2.026014	CDS	80	6.1
CLIP2.026014_2	CLIP2.026014	CDS	80	6.1
CLIP2.052420_1	CLIP2.052420	CDS	80	6.1
CLIP2.052420_2	CLIP2.052420	CDS	80	6.1
LMJ.RY0402.048901_1	LMJ.RY0402.048901	5'UTR	95	5.5
LMJ.RY0402.048901_2	LMJ.RY0402.048901	5'UTR	95	5.5
LMJ.RY0402.073121_1	LMJ.RY0402.073121	CDS	73	5.5
LMJ.RY0402.073121_2	LMJ.RY0402.073121	CDS	73	5.5
LMJ.RY0402.089895_1	LMJ.RY0402.089895	5'UTR	95	5.5
LMJ.RY0402.089895_2	LMJ.RY0402.089895	5'UTR	95	5.5
LMJ.RY0402.098966_1	LMJ.RY0402.098966	3'UTR	95	5.5
LMJ.RY0402.098966_2	LMJ.RY0402.098966	3'UTR	95	5.5
LMJ.RY0402.104481_1	LMJ.RY0402.104481	3'UTR	95	5.5
LMJ.RY0402.104481_2	LMJ.RY0402.104481	3'UTR	95	5.5
LMJ.RY0402.118345_1	LMJ.RY0402.118345	5'UTR	95	5.5
LMJ.RY0402.118345_2	LMJ.RY0402.118345	5'UTR	95	5.5
LMJ.RY0402.122696_1	LMJ.RY0402.122696	CDS	73	5.5
LMJ.RY0402.129503_1	LMJ.RY0402.129503	3'UTR	95	5.5
LMJ.RY0402.129503_2	LMJ.RY0402.129503	3'UTR	95	5.5
LMJ.RY0402.156598_1	LMJ.RY0402.156598	3'UTR	95	5.5
LMJ.RY0402.156598_2	LMJ.RY0402.156598	3'UTR	95	5.5
LMJ.RY0402.182338_1	LMJ.RY0402.182338	intron	73	5.5
LMJ.RY0402.192020_1	LMJ.RY0402.192020	CDS	73	5.5
LMJ.RY0402.203181_1	LMJ.RY0402.203181	CDS	58	5.5
LMJ.RY0402.235367_1	LMJ.RY0402.235367	CDS	95	5.5
LMJ.RY0402.235367_2	LMJ.RY0402.235367	CDS	95	5.5
LMJ.RY0402.248262_1	LMJ.RY0402.248262	CDS	73	5.5

Gene Annotations

PFAM:	PF00211
PANTHER:	PTHR11920 PTHR11920:SF328
KEGG_ec:	EC:4.6.1.2
KEGG_orthology:	K11858
KOG:
Gene ontology terms::	GO:0009190, GO:0016849, GO:0035556
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Predator, screen 11 of 11 ( 78% confidence (FDR = 0.22))

Zeocin, screen 5 of 5 ( 90% confidence (FDR = 0.093))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.