Gene: Cre01.g048150
Overview
| Common name: | HLA8 |
| Defline: | (1 of 2) 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease; Transcriptional co-activator/nuclease induced by high light |
| Description: | Staphylococcal nuclease homolog. Thermonuclease family. Induced under high light condition [PMID: 12000678]. A part of post-transcriptional gene silencing machinery [PMID: 11782532] |
| Synonyms: | Cre01.g048150.t1.1,g1070.t1 |
| Chromosome: | chromosome 1 |
Protein Localization
A plasmid for expressing Cre01.g048150 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre01.g048150-Venus-3xFLAG
Imaged strain: CSI_LW03F10
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/not pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002747_1 | CLIP2.002747 | CDS | 80 | 6.1 |
| CLIP2.002747_2 | CLIP2.002747 | CDS | 80 | 6.1 |
| CLIP2.004875_1 | CLIP2.004875 | intron | 80 | 6.1 |
| LMJ.RY0402.085608_1 | LMJ.RY0402.085608 | intron | 58 | 5.5 |
Gene Annotations
| PFAM: | PF00565 |
| PANTHER: | PTHR12302 |
| KEGG_ec: | EC:3.1.31.1 |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0003676, GO:0016788 |
| Best arabidopsis TAIR name: | AT2G40410.2 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Staphylococcal nuclease homologue |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.