Insertion junction: CLIP2.004875_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004875
Chromosome:chromosome 1
Location:6738921
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g048150 HLA8 (1 of 2) 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease; Transcriptional co-activator/nuclease induced by high light intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCTGCCCGTGTACGGGCGTACGGCGCTGCACGTACCGCAGGCAGTAC
Internal bar code:TCACCGGCCAAGTAGCTGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2639
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCAGATCAATGCGCACG
Suggested primer 2:GTGGATGGGTGCAGCATAGT