Gene: Cre01.g050100
Overview
| Common name: | DPD1 |
| Defline: | Diaminopimelate decarboxylase; (1 of 1) K01586 - diaminopimelate decarboxylase (lysA) |
| Description: | EC:4.1.1.20; lysine synthesis enzyme (LysA); plastid location expected based on homology |
| Synonyms: | g1108.t1,Cre01.g050100.t1.1,DPD1 |
| Chromosome: | chromosome 1 |
Protein Localization
A plasmid for expressing Cre01.g050100 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre01.g050100-Venus-3xFLAG
Imaged strain: CSI_LW07F2
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001550_1 | CLIP2.001550 | 3'UTR | 63 | 6.1 |
| CLIP2.004483_2 | CLIP2.004483 | intron | 40 | 6.1 |
| CLIP2.006334_1 | CLIP2.006334 | intron | 80 | 6.1 |
Gene Annotations
| PFAM: | PF00278, PF01168 |
| PANTHER: | PTHR11482 PTHR11482:SF5 |
| KEGG_ec: | EC:4.1.1.20 |
| KEGG_orthology: | K01586 |
| KOG: | KOG0622 |
| Gene ontology terms:: | GO:0003824, GO:0008836, GO:0009089 |
| Best arabidopsis TAIR name: | AT3G14390 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Pyridoxal-dependent decarboxylase family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.