Insertion junction: CLIP2.001550_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001550
Chromosome:chromosome 1
Location:7007530
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g050100 DPD1 Diaminopimelate decarboxylase; (1 of 1) K01586 - diaminopimelate decarboxylase (lysA) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTTCAGCGCCCGCCAACCACAGAACGCTAAGTTGCATGCAGATAAAT
Internal bar code:AACGTTACTGGTATTGGTTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:906
LEAP-Seq percent confirming:43.75
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAAATCCACGTCAGCCT
Suggested primer 2:TCGTCCTGTGCTGTGGTAAC