Gene: Cre02.g079400
Overview
| Common name: | |
| Defline: | (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) |
| Description: | |
| Synonyms: | g1450.t1,Cre02.g079400.t1.1 |
| Chromosome: | chromosome 2 |
Protein Localization
A plasmid for expressing Cre02.g079400 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre02.g079400-Venus-3xFLAG
Imaged strain: CSI_LW09H10
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
cytosol/cytosol (strong signal)
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.052023_1 | CLIP2.052023 | 3'UTR | 80 | 6.1 |
| CLIP2.052023_2 | CLIP2.052023 | 3'UTR | 80 | 6.1 |
| CLIP2.065380_1 | CLIP2.065380 | 3'UTR | 80 | 6.1 |
| CLIP2.065380_2 | CLIP2.065380 | 3'UTR | 80 | 6.1 |
| CLIP2.071298_1 | CLIP2.071298 | 3'UTR | 80 | 6.1 |
| CLIP2.071298_2 | CLIP2.071298 | 3'UTR | 80 | 6.1 |
| CLIP2.076314_1 | CLIP2.076314 | 3'UTR | 80 | 6.1 |
| CLIP2.076314_2 | CLIP2.076314 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.080860_1 | LMJ.RY0402.080860 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.164659_1 | LMJ.RY0402.164659 | intron | 73 | 5.5 |
| LMJ.RY0402.185171_1 | LMJ.RY0402.185171 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.242844_1 | LMJ.RY0402.242844 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00076 |
| PANTHER: | PTHR24012 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0003676 |
| Best arabidopsis TAIR name: | AT4G13860 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.