Insertion junction: CLIP2.065380_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065380
Chromosome:chromosome 2
Location:960670
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g079400 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTATGCTAGCTTTGGGTTACTTTAGCTTTGCCTGGGGTTTCACAGGC
Internal bar code:GCAAGACGATGACTAAATGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1284
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCTTAGCTTGTATGTGC
Suggested primer 2:AGGAGGAGTTCGGTTTGCAG