Insertion junction: CLIP2.076314_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076314
Chromosome:chromosome 2
Location:960711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g079400 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACAGGCTCGTAAAGGGTCCTGAGGACAGCTTGCCGGGTTCGGGGCGC
Internal bar code:TGAGCCAGGTAGGATTAGTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3615
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCTTAGCTTGTATGTGC
Suggested primer 2:AGGAGGAGTTCGGTTTGCAG