Gene: Cre03.g201300

Overview

Common name:SSA10
Defline:cilia-sensing, structure and/or assembly; (1 of 1) PTHR10157//PTHR10157:SF27 - DOPAMINE BETA HYDROXYLASE RELATED // SUBFAMILY NOT NAMED
Description:identified by comparative genomics as being present only in organisms having cilia, including non-motile cilia; may have role in sensing, structure and/or assembly (SSA)
Synonyms:g4299.t1
Chromosome:chromosome 3

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.008819_1 CLIP2.008819 intron 80 6.1
CLIP2.008819_2 CLIP2.008819 intron 80 6.1
CLIP2.017118_1 CLIP2.017118 CDS 80 6.1
CLIP2.017118_2 CLIP2.017118 CDS 80 6.1
CLIP2.028571_1 CLIP2.028571 intron 80 6.1
CLIP2.028571_2 CLIP2.028571 intron 80 6.1
CLIP2.035252_1 CLIP2.035252 CDS 80 6.1
CLIP2.035252_2 CLIP2.035252 CDS 80 6.1
CLIP2.050987_1 CLIP2.050987 CDS 80 6.1
CLIP2.051117_1 CLIP2.051117 intron 80 6.1
CLIP2.051117_2 CLIP2.051117 intron 80 6.1
CLIP2.053618_1 CLIP2.053618 CDS 80 6.1
CLIP2.073180_1 CLIP2.073180 intron 80 6.1
CLIP2.079207_1 CLIP2.079207 intron 40 6.1
LMJ.RY0402.038967_1 LMJ.RY0402.038967 intron 95 5.5
LMJ.RY0402.038967_2 LMJ.RY0402.038967 CDS 95 5.5
LMJ.RY0402.060965_1 LMJ.RY0402.060965 CDS 95 5.5
LMJ.RY0402.060965_2 LMJ.RY0402.060965 CDS 95 5.5
LMJ.RY0402.083807_1 LMJ.RY0402.083807 3'UTR 73 5.5
LMJ.RY0402.087728_1 LMJ.RY0402.087728 intron 73 5.5
LMJ.RY0402.089973_1 LMJ.RY0402.089973 intron 73 5.5
LMJ.RY0402.093774_1 LMJ.RY0402.093774 CDS 73 5.5
LMJ.RY0402.120649_1 LMJ.RY0402.120649 3'UTR 73 5.5
LMJ.RY0402.151911_2 LMJ.RY0402.151911 CDS 73 5.5
LMJ.RY0402.154562_1 LMJ.RY0402.154562 intron 95 5.5
LMJ.RY0402.154562_2 LMJ.RY0402.154562 intron 95 5.5
LMJ.RY0402.175126_1 LMJ.RY0402.175126 5'UTR 73 5.5
LMJ.RY0402.193924_1 LMJ.RY0402.193924 intron 95 5.5
LMJ.RY0402.193924_2 LMJ.RY0402.193924 intron 95 5.5
LMJ.RY0402.196950_1 LMJ.RY0402.196950 intron 73 5.5
LMJ.RY0402.208790_1 LMJ.RY0402.208790 intron 73 5.5
LMJ.RY0402.210762_1 LMJ.RY0402.210762 intron 73 5.5

Gene Annotations

PFAM:PF01082, PF03351, PF03712
PANTHER: PTHR10157 PTHR10157:SF27
KEGG_ec:EC:1.14.17.1
KEGG_orthology:K00503
KOG:KOG3568
Gene ontology terms::GO:0003824, GO:0004497, GO:0005507, GO:0016715, GO:0055114
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Tunicamycin, screen 2 of 3 ( 99% confidence (FDR = 1.2e-06))
Tunicamycin, screen 3 of 3 ( 99% confidence (FDR = 2.4e-08))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.