Gene: Cre04.g221550

Overview

Common name:CVDE1,NPQ1,FAO5,CVDE,VDE
Defline:Chlorophycean Violaxanthin De-epoxidase; (1 of 3) 5.5.1.19 - Lycopene beta-cyclase
Description:Atypical chlorophycean violaxanthin de-epoxidase, not orthologous to land plant VDE; FAD-dependent oxidoreductase; located on stromal side of theylakoid
Synonyms:VDE,CVDE,g4835.t1,FAO5,Cre04.g221550.t1.1,NPQ1
Chromosome:chromosome 4

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.000065_1 CLIP2.000065 3'UTR 80 6.1
CLIP2.000065_2 CLIP2.000065 3'UTR 80 6.1
CLIP2.000242_1 CLIP2.000242 intron 80 6.1
CLIP2.000242_2 CLIP2.000242 intron 80 6.1
CLIP2.000850_1 CLIP2.000850 3'UTR 80 6.1
CLIP2.000883_1 CLIP2.000883 intron 80 6.1
CLIP2.000883_2 CLIP2.000883 intron 80 6.1
CLIP2.000919_1 CLIP2.000919 intron 63 6.1
CLIP2.001040_1 CLIP2.001040 intron 40 6.1
LMJ.RY0402.069021_2 LMJ.RY0402.069021 3'UTR 73 5.5
LMJ.RY0402.078002_1 LMJ.RY0402.078002 intron 95 5.5
LMJ.RY0402.078002_2 LMJ.RY0402.078002 intron 95 5.5
LMJ.RY0402.119208_1 LMJ.RY0402.119208 intron 95 5.5
LMJ.RY0402.119208_2 LMJ.RY0402.119208 intron 95 5.5
LMJ.RY0402.120886_1 LMJ.RY0402.120886 intron 73 5.5
LMJ.RY0402.126732_1 LMJ.RY0402.126732 CDS 58 5.5
LMJ.RY0402.137972_1 LMJ.RY0402.137972 3'UTR 95 5.5
LMJ.RY0402.137972_2 LMJ.RY0402.137972 3'UTR 95 5.5
LMJ.RY0402.155025_1 LMJ.RY0402.155025 intron 58 5.5
LMJ.RY0402.156865_1 LMJ.RY0402.156865 CDS 73 5.5
LMJ.RY0402.159099_1 LMJ.RY0402.159099 intron 73 5.5
LMJ.RY0402.162431_1 LMJ.RY0402.162431 5'UTR 95 5.5
LMJ.RY0402.162431_2 LMJ.RY0402.162431 5'UTR 95 5.5
LMJ.RY0402.204765_1 LMJ.RY0402.204765 intron 73 5.5
LMJ.RY0402.211077_3 LMJ.RY0402.211077 intron 95 5.5
LMJ.RY0402.211077_4 LMJ.RY0402.211077 intron 95 5.5
LMJ.RY0402.237221_1 LMJ.RY0402.237221 3'UTR 73 5.5
LMJ.RY0402.252104_1 LMJ.RY0402.252104 intron 73 5.5
LMJ.RY0402.256152_1 LMJ.RY0402.256152 intron 73 5.5

Gene Annotations

PFAM:
PANTHER: PTHR32098 PTHR32098:SF5
KEGG_ec:EC:5.5.1.19
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:AT2G32640.1
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:Lycopene beta/epsilon cyclase protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 3 of 6 ( 81% confidence (FDR = 0.19))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.