| Common name: | PFH15,P4H-1,P4G15,PHX10 |
| Defline: | Prolyl 4-hydroxylase 15; (1 of 5) PTHR10869//PTHR10869:SF55 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // OXOGLUTARATE/IRON-DEPENDENT OXYGENASE |
| Description: | Procollagen-proline dioxygenase homolog, requires Fe2+ and ascorbate. Studied in detail by Keskiaho et al. [PMID: 17220203] as v2 C_360012, who named this Cr-P4H-1; there are presumably 2 alternative transcripts for this gene |
| Synonyms: | g5240.t1,P4H-1,P4G15,PHX10 |
| Chromosome: | chromosome 5 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.013705_1 | CLIP2.013705 | CDS | 80 | 6.1 |
| CLIP2.014735_1 | CLIP2.014735 | intron | 80 | 6.1 |
| CLIP2.014735_2 | CLIP2.014735 | intron | 80 | 6.1 |
| CLIP2.024112_1 | CLIP2.024112 | intron | 80 | 6.1 |
| CLIP2.041875_1 | CLIP2.041875 | CDS | 80 | 6.1 |
| CLIP2.041875_2 | CLIP2.041875 | CDS | 80 | 6.1 |
| CLIP2.057682_1 | CLIP2.057682 | 3'UTR | 80 | 6.1 |
| CLIP2.070122_1 | CLIP2.070122 | 3'UTR | 80 | 6.1 |
| CLIP2.070122_2 | CLIP2.070122 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.214582_1 | LMJ.RY0402.214582 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.214582_2 | LMJ.RY0402.214582 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.226562_1 | LMJ.RY0402.226562 | 5'UTR_intron | 73 | 5.5 |
| LMJ.RY0402.237024_1 | LMJ.RY0402.237024 | intron | 73 | 5.5 |
| PFAM: | PF03171 |
| PANTHER: | PTHR10869 PTHR10869:SF55 |
| KEGG_ec: | EC:1.14.11.2 |
| KEGG_orthology: | K00472 |
| KOG: | |
| Gene ontology terms:: | GO:0005506, GO:0016491, GO:0016705, GO:0031418, GO:0055114 |
| Best arabidopsis TAIR name: | AT3G28480.1 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Oxoglutarate/iron-dependent oxygenase |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.