Insertion junction: CLIP2.070122_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070122
Chromosome:chromosome 5
Location:592021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244700 PFH15,P4H-1,P4G15,PHX10 Prolyl 4-hydroxylase 15; (1 of 5) PTHR10869//PTHR10869:SF55 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // OXOGLUTARATE/IRON-DEPENDENT OXYGENASE 3'UTR
Cre05.g244750 (1 of 1) K13205 - A1 cistron-splicing factor AAR2 (AAR2, C20orf4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAAAGTGGCTGAGCAGGCAGCTGCAGCTTCGGACCTTCGGTGAATCGG
Internal bar code:CCAGTTGTTTAATTCAACGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:860
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGCCGTGATTTACTGTCA
Suggested primer 2:CCGCATATGCCATCCACTCT