Insertion junction: CLIP2.057682_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057682
Chromosome:chromosome 5
Location:592026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244700 PFH15,P4H-1,P4G15,PHX10 Prolyl 4-hydroxylase 15; (1 of 5) PTHR10869//PTHR10869:SF55 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // OXOGLUTARATE/IRON-DEPENDENT OXYGENASE 3'UTR
Cre05.g244750 (1 of 1) K13205 - A1 cistron-splicing factor AAR2 (AAR2, C20orf4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCAAAGCTTCACCACCGCGTGGTGCCACCATGCCTCCATCGGACATT
Internal bar code:TACCGAAACCTGTGAAGCACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1289
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCATATGCCATCCACTCT
Suggested primer 2:GGGGCCGTGATTTACTGTCA