Gene: Cre06.g250250
Overview
| Common name: | ATPVC,ATPVC1 |
| Defline: | (1 of 1) K02148 - V-type H+-transporting ATPase subunit C (ATPeV1C, ATP6C); Vacuolar ATP synthase subunit C |
| Description: | vacuolar ATP synthase subunit C, vacuolar H+ ATPase V1 sector, subunit C |
| Synonyms: | ATPVC,g5604.t1,Cre06.g250250.t1.1 |
| Chromosome: | chromosome 6 |
Protein Localization
A plasmid for expressing Cre06.g250250 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre06.g250250-Venus-3xFLAG
Imaged strain: CSI_LW08G10
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
secretory pathway/contractile vacuole
shapes in cytoplasm/a few medium puncta|vesicles in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.026445_1 | CLIP2.026445 | intron | 80 | 6.1 |
| LMJ.RY0402.091298_2 | LMJ.RY0402.091298 | intron | 73 | 5.5 |
| LMJ.RY0402.091298_3 | LMJ.RY0402.091298 | intron | 73 | 5.5 |
| LMJ.RY0402.096199_1 | LMJ.RY0402.096199 | intron | 73 | 5.5 |
Gene Annotations
| PFAM: | PF03223 |
| PANTHER: | PTHR10137 PTHR10137:SF0 |
| KEGG_ec: | 3.6.3.14 |
| KEGG_orthology: | K02148 |
| KOG: | KOG2909 |
| Gene ontology terms:: | GO:0015078, GO:0015991, GO:0033180 |
| Best arabidopsis TAIR name: | AT1G12840 |
| Best arabidopsis TAIR symbol: | ATVHA-C,DET3 |
| Best arabidopsis TAIR defline: | vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.