Insertion junction: CLIP2.026445_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026445
Chromosome:chromosome 6
Location:176766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g250250 ATPVC,ATPVC1 (1 of 1) K02148 - V-type H+-transporting ATPase subunit C (ATPeV1C, ATP6C); Vacuolar ATP synthase subunit C intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAAACAGCTGGGGGGCTTTCAGCATGGCACGCGACTTCGACTTTCAG
Internal bar code:TAAGGGCCTTGTTGGTAGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:446
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTTAGACCGGCGTCATACCC
Suggested primer 2:GTAGGGATGGAAGGCGTACG