Gene: Cre06.g278086
Overview
| Common name: | |
| Defline: | (1 of 1) PTHR11803//PTHR11803:SF17 - TRANSLATION INITIATION INHIBITOR // SUBFAMILY NOT NAMED |
| Description: | |
| Synonyms: | Cre13.g592900.t1.2,g6230.t1,Cre13.g592900.t1.1 |
| Chromosome: | chromosome 6 |
Protein Localization
A plasmid for expressing Cre06.g278086 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre06.g278086-Venus-3xFLAG
Imaged strain: CSI_LW08H5
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
cytosol/cytosol (strong signal)
nucleus/nucleoplasm
nucleus/nucleolus
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.011575_1 | CLIP2.011575 | intron | 80 | 6.1 |
| CLIP2.011575_2 | CLIP2.011575 | intron | 80 | 6.1 |
| CLIP2.035559_1 | CLIP2.035559 | CDS | 80 | 6.1 |
| CLIP2.035559_2 | CLIP2.035559 | CDS | 80 | 6.1 |
| CLIP2.054475_1 | CLIP2.054475 | CDS | 80 | 6.1 |
| LMJ.RY0402.112550_1 | LMJ.RY0402.112550 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.137103_1 | LMJ.RY0402.137103 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.254450_1 | LMJ.RY0402.254450 | intron | 73 | 5.5 |
Gene Annotations
| PFAM: | PF01042 |
| PANTHER: | PTHR11803 PTHR11803:SF17 |
| KEGG_ec: | EC:3.5.99.10 |
| KEGG_orthology: | |
| KOG: | KOG2317 |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT3G20390.1 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | endoribonuclease L-PSP family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.