Gene: Cre06.g279850
Overview
| Common name: | Tic62-NAD-6 |
| Defline: | (1 of 1) PTHR14194//PTHR14194:SF78 - NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED // SUBFAMILY NOT NAMED; Putative dehydrogenase |
| Description: | Short chain dehydrogenase belonging to the extended family [PMID: 12230552]. Similarity to the N-terminal domain of Tic62 [PMID: 17374152]. |
| Synonyms: | Tic62-NAD-6,Cre06.g279850.t1.1,g6506.t1 |
| Chromosome: | chromosome 6 |
Protein Localization
A plasmid for expressing Cre06.g279850 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre06.g279850-Venus-3xFLAG
Imaged strain: CSI_LW04G2
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
ambiguous
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.009151_1 | CLIP2.009151 | CDS | 80 | 6.1 |
| CLIP2.011474_1 | CLIP2.011474 | intron | 80 | 6.1 |
| CLIP2.013968_1 | CLIP2.013968 | CDS | 80 | 6.1 |
| CLIP2.013968_2 | CLIP2.013968 | CDS | 80 | 6.1 |
| CLIP2.016654_1 | CLIP2.016654 | CDS | 80 | 6.1 |
| CLIP2.016654_2 | CLIP2.016654 | CDS | 80 | 6.1 |
| CLIP2.049799_1 | CLIP2.049799 | intron | 80 | 6.1 |
| CLIP2.052497_1 | CLIP2.052497 | intron | 80 | 6.1 |
| CLIP2.052497_2 | CLIP2.052497 | intron | 80 | 6.1 |
| CLIP2.058732_1 | CLIP2.058732 | 3'UTR | 80 | 6.1 |
| CLIP2.058732_2 | CLIP2.058732 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.229927_1 | LMJ.RY0402.229927 | CDS | 95 | 5.5 |
| LMJ.RY0402.229927_2 | LMJ.RY0402.229927 | CDS | 95 | 5.5 |
| LMJ.SG0182.019616_1 | LMJ.SG0182.019616 | intron | 75 | 5.3 |
Gene Annotations
| PFAM: | PF13460 |
| PANTHER: | PTHR14194 PTHR14194:SF78 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT5G02240 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | NAD(P)-binding Rossmann-fold superfamily protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.