Insertion junction: CLIP2.049799_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049799
Chromosome:chromosome 6
Location:4793189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279850 Tic62-NAD-6 (1 of 1) PTHR14194//PTHR14194:SF78 - NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED // SUBFAMILY NOT NAMED; Putative dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTGATCTCGTCGCGCATTTTCCTAATTGCGCAGCAACATCTTGCAAT
Internal bar code:GGACTGTTGAAACAGGTACGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5804
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:131
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:131

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTTCTCAGCAGCCTTGA
Suggested primer 2:CAAGTTGGGCCCTGATAGCA