| Common name: | RAA6 |
| Defline: | psaA mRNA trans-splicing factor |
| Description: | Necessary for trans-splicing of psaA mRNA; |
| Synonyms: | g8159.t1 |
| Chromosome: | chromosome 7 |
A plasmid for expressing Cre07.g350700 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre07.g350700-Venus-3xFLAG
No localization data is available in our datasets for this protein.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001874_1 | CLIP2.001874 | CDS | 80 | 6.1 |
| CLIP2.001874_2 | CLIP2.001874 | CDS | 80 | 6.1 |
| CLIP2.002291_1 | CLIP2.002291 | intron | 80 | 6.1 |
| CLIP2.002291_2 | CLIP2.002291 | intron | 80 | 6.1 |
| CLIP2.003528_1 | CLIP2.003528 | CDS | 80 | 6.1 |
| CLIP2.003528_2 | CLIP2.003528 | CDS | 80 | 6.1 |
| CLIP2.004621_1 | CLIP2.004621 | intron | 80 | 6.1 |
| CLIP2.004621_2 | CLIP2.004621 | intron | 80 | 6.1 |
| CLIP2.005127_3 | CLIP2.005127 | CDS | 80 | 6.1 |
| CLIP2.005127_4 | CLIP2.005127 | CDS | 80 | 6.1 |
| CLIP2.077345_2 | CLIP2.077345 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.066501_1 | LMJ.RY0402.066501 | CDS | 58 | 5.5 |
| LMJ.RY0402.208103_2 | LMJ.RY0402.208103 | CDS | 73 | 5.5 |
| LMJ.RY0402.251855_3 | LMJ.RY0402.251855 | CDS | 73 | 5.5 |
| LMJ.RY0402.253749_1 | LMJ.RY0402.253749 | CDS | 95 | 5.5 |
| LMJ.RY0402.253749_2 | LMJ.RY0402.253749 | CDS | 95 | 5.5 |
| PFAM: | |
| PANTHER: | |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| Photosynthesis or light sensitivity, screen 7 of 12 ( 77% confidence (FDR = 0.23)) |
| Photosynthesis or light sensitivity, screen 8 of 12 ( 78% confidence (FDR = 0.22)) |
| Photosynthesis or light sensitivity, screen 10 of 12 ( 76% confidence (FDR = 0.24)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.