Gene: Cre09.g393551

Overview

Common name:
Defline:(1 of 1) IPR001202//IPR002713 - WW domain // FF domain
Description:
Synonyms:g9419.t1
Chromosome:chromosome 9

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.013685_1 CLIP2.013685 intron 80 6.1
CLIP2.013685_2 CLIP2.013685 intron 80 6.1
CLIP2.014429_1 CLIP2.014429 intron 80 6.1
CLIP2.014429_2 CLIP2.014429 intron 80 6.1
CLIP2.041400_1 CLIP2.041400 intron 80 6.1
CLIP2.041400_2 CLIP2.041400 intron 80 6.1
CLIP2.047329_1 CLIP2.047329 intron 80 6.1
CLIP2.049304_1 CLIP2.049304 CDS 80 6.1
CLIP2.049304_2 CLIP2.049304 CDS 80 6.1
CLIP2.051854_2 CLIP2.051854 intron 80 6.1
CLIP2.059748_1 CLIP2.059748 intron 80 6.1
CLIP2.073891_1 CLIP2.073891 CDS 63 6.1
LMJ.RY0402.039291_1 LMJ.RY0402.039291 intron 95 5.5
LMJ.RY0402.039291_2 LMJ.RY0402.039291 intron 95 5.5
LMJ.RY0402.080101_1 LMJ.RY0402.080101 CDS 95 5.5
LMJ.RY0402.080101_2 LMJ.RY0402.080101 CDS 95 5.5
LMJ.RY0402.114243_1 LMJ.RY0402.114243 intron 95 5.5
LMJ.RY0402.114243_2 LMJ.RY0402.114243 intron 95 5.5
LMJ.RY0402.130452_1 LMJ.RY0402.130452 intron 95 5.5
LMJ.RY0402.130452_2 LMJ.RY0402.130452 intron 95 5.5
LMJ.RY0402.215090_1 LMJ.RY0402.215090 intron 95 5.5
LMJ.RY0402.215090_2 LMJ.RY0402.215090 intron 95 5.5
LMJ.RY0402.219443_1 LMJ.RY0402.219443 intron 58 5.5
LMJ.RY0402.240804_1 LMJ.RY0402.240804 intron 95 5.5
LMJ.RY0402.240804_2 LMJ.RY0402.240804 intron 95 5.5

Gene Annotations

PFAM:PF00397, PF01846
PANTHER: PTHR15377 PTHR15377:SF3
KEGG_ec:
KEGG_orthology:K12824
KOG:KOG0155
Gene ontology terms::GO:0005515
Best arabidopsis TAIR name:AT3G19840
Best arabidopsis TAIR symbol:ATPRP40C,PRP40C
Best arabidopsis TAIR defline:pre-mRNA-processing protein 40C
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 5 of 6 ( 89% confidence (FDR = 0.11))
Paromomycin, screen 6 of 6 ( 93% confidence (FDR = 0.065))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.