Insertion junction: CLIP2.041400_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041400
Chromosome:chromosome 9
Location:2427811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393551 (1 of 1) IPR001202//IPR002713 - WW domain // FF domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAATGTAGCCCCACCCCACCCCACTCCGTTGTCAAGCATCGGCCACGC
Internal bar code:GGCCGTCGATGATTTCCAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1014
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGGATTGAGCATGGGTGACA
Suggested primer 2:GCGCAGTGTTTGTTGGAAGT