Gene: Cre11.g480950
Overview
| Common name: | |
| Defline: | (1 of 10) PF00505 - HMG (high mobility group) box (HMG_box); High mobility group protein |
| Description: | High mobility group proteins, non-histone components of chromatin. ChromoDB HMGB346 |
| Synonyms: | Cre11.g480950.t1.1,g11939.t1 |
| Chromosome: | chromosome 11 |
Protein Localization
A plasmid for expressing Cre11.g480950 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre11.g480950-Venus-3xFLAG
Imaged strain: CSI_LW12C9
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
nucleus/nucleoplasm
nucleus/nucleolus
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.058758_1 | CLIP2.058758 | CDS | 40 | 6.1 |
| LMJ.RY0402.072053_1 | LMJ.RY0402.072053 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.224463_2 | LMJ.RY0402.224463 | 5'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00505 |
| PANTHER: | PTHR13711 |
| KEGG_ec: | |
| KEGG_orthology: | K10802 |
| KOG: | KOG0381 |
| Gene ontology terms:: | GO:0003677 |
| Best arabidopsis TAIR name: | AT1G20696.2 |
| Best arabidopsis TAIR symbol: | HMGB3,NFD03,NFD3 |
| Best arabidopsis TAIR defline: | high mobility group B3 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.