Insertion junction: CLIP2.058758_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058758
Chromosome:chromosome 11
Location:4075371
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre11.g480950 (1 of 10) PF00505 - HMG (high mobility group) box (HMG_box); High mobility group protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCCGGCGGTTGGGGGAGCTATGGAAGGAGTGCGAGGACGACGACAAG
Internal bar code:AGTACACCCGATCCGAGTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:201
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCATCGAGTTAAGCAGC
Suggested primer 2:GTACCCGCTTGCGCTTATTG