| Common name: | HDS1 |
| Defline: | (1 of 1) 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
| Description: | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase), chloroplast precursor; (ispG) (gcpE) [PMID: 15849308] |
| Synonyms: | HDS1,g12178.t1 |
| Chromosome: | chromosome 12 |
We did not create a plasmid for this gene.
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre09.g415700 | CAH3 | Cre12.g490350 | HDS1 | Mackinder et al. 2017 |
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.057518_1 | CLIP2.057518 | 3'UTR | 80 | 6.1 |
| CLIP2.071854_1 | CLIP2.071854 | 3'UTR | 63 | 6.1 |
| CLIP2.078622_1 | CLIP2.078622 | 5'UTR | 80 | 6.1 |
| CLIP2.079233_1 | CLIP2.079233 | 5'UTR | 80 | 6.1 |
| CLIP2.079233_2 | CLIP2.079233 | 5'UTR | 80 | 6.1 |
| LMJ.RY0402.111756_1 | LMJ.RY0402.111756 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.111756_2 | LMJ.RY0402.111756 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.125986_1 | LMJ.RY0402.125986 | intron | 73 | 5.5 |
| PFAM: | PF04551 |
| PANTHER: | PTHR30454 |
| KEGG_ec: | EC:1.17.7.1 |
| KEGG_orthology: | K03526 |
| KOG: | |
| Gene ontology terms:: | GO:0005506, GO:0008299, GO:0016114, GO:0044237, GO:0046429, GO:0055114 |
| Best arabidopsis TAIR name: | AT5G60600 |
| Best arabidopsis TAIR symbol: | CLB4,CSB3,GCPE,HDS,ISPG |
| Best arabidopsis TAIR defline: | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.