Insertion junction: LMJ.RY0402.125986_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.125986
Chromosome:chromosome 12
Location:1124525
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g490350 HDS1 (1 of 1) 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGGCGTGTAGGGTCTCGCCACCTTTTT
Internal bar code:ATCGCGCGGAACGTAGCTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:81
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CATAAGAGCCCTTCGCAAAC
Suggested primer 2:TTGCTTCATTGACCACCAAA